Metagenomics analysis
guided search and assembly of short peptides using HMM models
an Efficient Reference-guided Short Read Assembler
Guided Reference-based Assembly of Short Peptides
Detection of RNA using Assembly Graph from Metagenomics data
integrated Metagenomic Protein Predictor
RNA analysis
a graph alignment approach for RNA structural motif identification
RNAMotifScan aims to find the maximum common isosteric base-pairs between two RNA structures
An algorithm in which two alternative structures can be folded simultaneously given the experimental probing information regarding the mixture of these two alternative structures
ERA is an RNA structure alignment tool that aims at fast comparison of RNA secondary structures.
Other
An efficient and robust CLique-finding CLustering (CLCL) algorithm